Results & Downloads
Factsheet 2 – iPC Platforms
The second iPC factsheet about the iPC Platforms is now available. It describes the 5 cloud-based platforms that were developed during the project framework from our partners BSC, XLAB, CHOP, AMC, PMC, DKFZ, UGent and BCM.
August 01, 2022

Factsheet 2 – iPC Platforms
D1.4 Model development data including genetic perturbation screens and gene-drug synergies
This deliverable reports on the generation of CROPseq and drug screening data for two Ewing Sarcoma cell lines, one Hepatoblastoma cell line and one B-cell Acute Lymphoblastic Leukemia cell line.
July 29, 2022

D1.4 Model development data including genetic perturbation screens and gene-drug synergies
Factsheet 1 – Tumour Type Working Groups
The first iPC factsheet on Tumour Type Working Groups is now available. It describes the 5 different types of childhood cancer and the work our partners are doing.
The working groups are led by our partners IGTP, DKFZ, PMC, CURIE, UZH and MPG.
July 04, 2022

Factsheet 1 – Tumour Type Working Groups
Newsletter Issue 02
The second REINDEER newsletter is now available for download. In this edition, we present a message from the technical lead, an update on current work in the project including recent publications, a listing of past & upcoming events, an overview of REINDEER related podcasts and a special focus on the teams’ contributions to ICC 2022. Please have a look and of course, share within your network.
June 22, 2022

Newsletter Issue 02
D7.2 Software to define tumour subclones and association with therapy response
Flow cytometry is an important diagnostic tool in childhood acute lymphoblastic leukaemia (ALL), flow cytometry data analysis is limited by multiple sources of bias and variation. We present a unified machine learning framework for automated analysis of a standardized diagnostic paediatric leukaemia staining that can overcome these challenges. We applied our framework in a large cohort of ALL flow cytometry samples and demonstrated how it can robustly extract the frequencies of cell lineage populations with minimal expert intervention. This work provides a proof of concept that our method meets the needs of an automated analysis tool for diagnostic flow cytometry data.
June 01, 2022

D7.2 Software to define tumour subclones and association with therapy response
D8.3 Metabolic models
Oncogene-driven metabolic rewiring in cancer is key to allow proliferation of tumour cells in low nutrient and oxygen conditions. To study such phenomena, reconstructing context-specific metabolic models through omics data integration is crucial. Here we report the original pipeline to construct context-specific metabolic models from scRNA-seq data and we applied it to scRNA-seq data from Ewing Sarcoma.
May 31, 2022

D8.3 Metabolic models
D4.3 Topological analysis of multi-omics and multi-cancer molecular networks resulting in the definition of molecular mechanisms
Three types of network-based analysis of gene-gene interaction networks have been suggested and tested on the multi-omics paediatric cancer datasets. User-friendly computational environment for joint application of matrix factorization and network analysis has been implemented.
May 31, 2022

D4.3 Topological analysis of multi-omics and multi-cancer molecular networks resulting in the definition of molecular mechanisms
D8.2 Network models for molecular target identification
We focused on the development of patient specific signalling networks using prior knowledge about the molecular events and CRISPR perturbation datasets and associated the activity of the nodes of signalling network with drug response data to find molecular targets.
May 30, 2022

D8.2 Network models for molecular target identification
Videos
SERENA H2020 - Addressing Excellent Science, Industrial Leadership and Societal Challenges.
Find out more about this project: https://serena-h2020.eu/ The SERENA project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No 779305. This video may be downloaded, shared, embedded and reposted across various platforms. You can turn on/off the subtitles (captions) by clicking on the "CC" button on the bottom right side of this video. To download the video with embedded captions please follow this link: https://vimeo.com/420572681/95c2687049
REALHOLO H2020 - Phase modulating micro mirror array for real holographic mixed-reality displays
The merging of real and virtual worlds to produce mixed reality (MR) environments is becoming a realistic component of future society. The effective use of MR demands a natural visual experience without physiological side effects for the user. REALHOLO is a project developed to meet these needs by researching advanced micro-mirror-based piston-type spatial light modulator (SLM) modulating the phase of visible light with optical features far superior to any liquid crystal-based alternative.The SLM will facilitate 3D display applications and active illumination and sensing. Find out more about this project: https://realholo.eu/ This video may be downloaded, shared, embedded and reposted across various platforms. This project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 101014977. This project is an initiative of the Photonics Public Private Partnership. You can turn on/off the subtitles (captions) by clicking on the "CC" button on the bottom right side of this video. To download the video with embedded captions please follow this link: https://vimeo.com/674896917/06c94b880a
mGov4EU H2020 - Mobile Cross-Border Government Services for Europe
mGov4EU pushes forward the practical use of inclusive mobile Government services in Europe, bringing such services in line with EU citizens’ expectations for safe, resilient and sustainable mobile communication. Innovating electronic identity management, storage of data and the exchange of electronic documents are key elements. Starting from the foundation of Single Digital Gateway Regulation (SDGR), mGov4EU provides new ways of cross-border service provision correlated and interlinked with eIDAS Regulation on cross-border identification and authentication. mGov4EU leverages for the first time both together, SDGR and eIDAS for mobile-device usage. The mGov4EU project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 959072. You can turn on/off the subtitles (captions) by clicking on the "CC" button on the bottom right side of this video. To download the video with embedded captions please follow this link: https://vimeo.com/629831452/2212152e21
REINDEER H2020 - Project Overview
The REINDEER project will develop a new smart connect-compute platform with a capacity that is scalable to quasi-infinite, and that offers perceived zero latency and interaction with an extremely high number of embedded devices. Find out more about this project: https://reindeer-project.eu/ This video may be downloaded, shared, embedded and reposted across various platforms. The REINDEER project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 101013425. You can turn on/off the subtitles (captions) by clicking on the "CC" button on the bottom right side of this video. To download the video with embedded captions please follow this link: https://vimeo.com/629837218/9466826dfb
Safe4RAIL-2 -CONNECTA-2: Final Dissemination Video
This video shows the impact and results from the Safe4RAIL-2 project which has examined ways of utilizing wireless (5G), interoperable, on-board communication as well as universal integration of the Train Control and Monitoring System (TCMS). In collaboration with its complementary action project CONNECTA-2, Safe4RAIL-2 has developed railway demonstrators where next-generation architectures and components for TCMS will be integrated. To eliminate costly field testing, Safe4RAIL-2 has performed testing in a simulated environment. The results from Safe4RAIL-2 will define new train standards and pave the way for deterministic communications as well as secure and interoperable interconnections while increasing efficiency and safety of the TCMS. This project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 826073. The information and views set out in this document are those of the author(s) and do not necessarily reflect the official opinion of Shift2Rail Joint Undertaking. The JU does not guarantee the accuracy of the data included in this article. Neither the JU nor any person acting on the JU’s behalf may be held responsible for the use which may be made of the information contained therein. This video may be downloaded, shared, embedded and reposted across various platforms. You can turn on/off the subtitles (captions) by clicking on the "CC" button on the bottom right side of this video. To download the video with embedded captions please follow this link: https://vimeo.com/technikon/s4r-2-c2-ci
DECODER H2020 - Demonstrator Video
The DECODER project has received funding from the European Union's Horizon 2020 research and innovation programme under grant agreement number 824231. Find out more about this project: https://www.decoder-project.eu/ This video may be downloaded, shared, embedded and reposted across various platforms. To download the video with embedded captions please follow this link: https://vimeo.com/540180542/8be79b4641
Safe4RAIL-2 - 5G Reveals Wireless Options for Improving Safety and Reliability of Trains in Euro...
The Safe4RAIL-2 H2020 project will develop LTE devices suitable for a wireless train backbone, analyzing possible solutions for wireless communications within a consist, virtual coupling and 5G technologies for railways. In this interview, the project coordinator, Technikon, speaks with Julián Andrade from Huawei about his role as advisory board member for Safe4RAIL. This project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 826073. The information and views set out in this document are those of the author(s) and do not necessarily reflect the official opinion of Shift2Rail Joint Undertaking. The JU does not guarantee the accuracy of the data included in this article. Neither the JU nor any person acting on the JU’s behalf may be held responsible for the use which may be made of the information contained therein. This video may be downloaded, shared, embedded and reposted across various platforms.
Safe4RAIL-2 - 5G Reveals Wireless Options for Improving Safety and Reliability of Trains in Euro...
The Safe4RAIL-2 H2020 project will develop LTE devices suitable for a wireless train backbone, analyzing possible solutions for wireless communications within a consist, virtual coupling and 5G technologies for railways. In this interview, the project coordinator, Technikon, speaks with Liesbet Van der Perre, a professor of Electrical Engineering Department of the KU Leuven. Her main research interests are in energy efficient wireless communication for IoT and beyond 5G systems. This project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 826073. The information and views set out in this document are those of the author(s) and do not necessarily reflect the official opinion of Shift2Rail Joint Undertaking. The JU does not guarantee the accuracy of the data included in this article. Neither the JU nor any person acting on the JU’s behalf may be held responsible for the use which may be made of the information contained therein. This video may be downloaded, shared, embedded and reposted across various platforms.
Safe4RAIL-2 - 5G Reveals Wireless Options for Improving Safety and Reliability of Trains in Euro...
We are once again talking about the EU project called Saf4RAIL-2. Part of this effort involves testing new wireless functions in trains; specifically the wireless train backbone and the wireless consist network. Today we speak with Raymond Knopp, a professor in digital communications from project partner Eurecom. He is also on the executive committee at the OpenAirInterface Community so it's quite fitting that we talk about how OAI fits into Safe4RAIL-2. This project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 826073. The information and views set out in this document are those of the author(s) and do not necessarily reflect the official opinion of Shift2Rail Joint Undertaking. The JU does not guarantee the accuracy of the data included in this article. Neither the JU nor any person acting on the JU’s behalf may be held responsible for the use which may be made of the information contained therein. This video may be downloaded, shared, embedded and reposted across various platforms.
iPC H2020 - Interview with Salvador Capella-Gutierrez
Interview with Salvador Capella-Gutierrez (Barcelona Supercomputing Center) about the iPC H2020 project. Find out more about this project: http://www.ipc-project.eu/ This video may be downloaded, shared, embedded and reposted across various platforms. You can turn on/off the subtitles (captions) by clicking on the "CC" button on the bottom right side of this video. To download the video with embedded captions please follow this link: https://vimeo.com/387979453/56eb341fe1
SERENA H2020 - Interview Uwe Maaß
Interview with Uwe Maaß from Fraunhofer IZM in Brussels, July 2019, talking about the Serena H2020 Project. Find out more about this project: https://serena-h2020.eu/ This video may be downloaded, shared, embedded and reposted across various platforms. You can turn on/off the subtitles (captions) by clicking on the "CC" button on the bottom right side of this video. To download the video with embedded captions please follow this link: https://vimeo.com/362314792/b234d20b72
iPC H2020 - Interview with Hans Lehrach
Interview with Hans Lehrach (Max Planck Institute for Molecular Genetics) about the iPC H2020 project. Find out more about this project: http://www.ipc-project.eu/ This video may be downloaded, shared, embedded and reposted across various platforms. You can turn on/off the subtitles (captions) by clicking on the "CC" button on the bottom right side of this video. To download the video with embedded captions please follow this link: https://vimeo.com/387977092/aba9bdd7c0
VESSEDIA - Interview Franck Sadmi
Interview with Franck Sadmi from ANSSI (previously Bureau Veritas), France, September 2019, talking about the VESSEDIA H2020 Project. VESSEDIA (Verification Engineering of Safety and Security Critical Industrial Applications) aims at enhancing safety and security of information and communication technology (ICT) and especially the Internet of Things (IoT). More precisely the aim of this project consists in making formal methods more accessible for application domains that want to improve the security and reliability of their software applications by means of Formal Methods. Find out more about this project: https://vessedia.eu/ The VESSEDIA project has received funding from the European Union's Horizon 2020 research and innovation programme under grant agreement No. 731453. This video may be downloaded, shared, embedded and reposted across various platforms. You can turn on/off the subtitles (captions) by clicking on the "CC" button on the bottom right side of this video. To download the video with embedded captions please follow this link: https://vimeo.com/365463211/2efad8b76d
VESSEDIA - Interview Bart Jacobs
Interview with Bart Jacobs from KU Leuven, Belgium, September 2019, talking about the VESSEDIA H2020 Project. VESSEDIA (Verification Engineering of Safety and Security Critical Industrial Applications) aims at enhancing safety and security of information and communication technology (ICT) and especially the Internet of Things (IoT). More precisely the aim of this project consists in making formal methods more accessible for application domains that want to improve the security and reliability of their software applications by means of Formal Methods. Find out more about this project: https://vessedia.eu/ The VESSEDIA project has received funding from the European Union's Horizon 2020 research and innovation programme under grant agreement No. 731453. This video may be downloaded, shared, embedded and reposted across various platforms. You can turn on/off the subtitles (captions) by clicking on the "CC" button on the bottom right side of this video. To download the video with embedded captions please follow this link: https://vimeo.com/372347399/07cc051274
iPC H2020 - Interview with Olivier Delattre
Interview with Olivier Delattre (Head of Paediatric Center from Institut Curie) about the iPC H2020 project. Find out more about this project: http://www.ipc-project.eu/ This video may be downloaded, shared, embedded and reposted across various platforms. You can turn on/off the subtitles (captions) by clicking on the "CC" button on the bottom right side of this video. To download the video with embedded captions please follow this link: https://vimeo.com/364010969/4804c904d8
Podcasts
iPC (4) H2020 Project: About why the future paediatric cancer treatment is in personalization
In this episode we welcome Davide Cirillo. He represents the Barcelona Supercomputing Center, a partner in iPC which, by the way, stands for Indivualized Peadiatric Cure. We talk about how explainable AI and machine learning is the key to tailor treatments for kids while minimizing the risks.
The iPC project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 826121.
See omnystudio.com/listener for privacy information.
iPC (4) H2020 Project: About why the future paediatric cancer treatment is in personalization
January 04, 2022
iPC (4) H2020 Project: About why the future paediatric cancer treatment is in personalization
iPC (3) H2020 Project: How algorithms can improve treatment for children with cancer
In this episode we talk with Pieter Mestdagh, principal investigator at the Cancer Research Insitute Ghent, who is a project partner in iPC.
He shares his teams methods with us for a better understanding of their motives and how algorithms can improve effective treatment for children with cancer.
The iPC project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 826121.
See omnystudio.com/listener for privacy information.
iPC (3) H2020 Project: How algorithms can improve treatment for children with cancer
January 03, 2022
iPC (3) H2020 Project: How algorithms can improve treatment for children with cancer
REINDEER (2) H2020 Project: A closer look at RadioWeaves Technology and how it might be used
In this Episode, we will speak with Erik Larsson, Professor and Head of the Division for Communication Systems in the Department of Electrical Engineering at Linköping University, about how the REINDEER H2020 Project can help facilitate the idea of embedded antennas by using RadioWeaves technology.
The REINDEER project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No.
101013425.
See omnystudio.com/listener for privacy information.
REINDEER (2) H2020 Project: A closer look at RadioWeaves Technology and how it might be used
December 21, 2021
REINDEER (2) H2020 Project: A closer look at RadioWeaves Technology and how it might be used
Ethics and Technology (6) – a Prerequisite for European Research: Engineering and Technology
In this episode we welcome Rebecca Roache, a British philosopher and Senior Lecturer at Royal Holloway, University of London and Jonathan Seglow, Associate Professor in the Department of Politics, International Relations and Philosophy also at at Royal Holloway.
See omnystudio.com/listener for privacy information.
Ethics and Technology (6) – a Prerequisite for European Research: Engineering and Technology
December 16, 2021
Ethics and Technology (6) – a Prerequisite for European Research: Engineering and Technology
EXFILES (5) H2020 Project: About Microscopic Views and the Hardware Approach
In this episode, we continue our in-depth look at the EXFILES project. Today we speak with Olivier Thomas, a partner in EXFILES, he along with his team of 10 cyber security experts are responsible for hardware solutions in EXFILES. He shares his thoughts on the project with us and how the knowledge derived from this project can help in training future generations of cyber security experts.
The EXFILES project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 883156
See omnystudio.com/listener for privacy information.
EXFILES (5) H2020 Project: About Microscopic Views and the Hardware Approach
December 16, 2021
EXFILES (5) H2020 Project: About Microscopic Views and the Hardware Approach
EXFILES (4) H2020 Project: An Inside View from an LEA Partner
In this episode, we look at the EXFILES project once again. Today we speak with Nicolas from the National Forensic Lab for the French Gendarmerie. He talks about the challenge of extracting forensic evidence from locked phones and how the EXFILES project can help LEA's to overcome this.
The EXFILES project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 883156
See omnystudio.com/listener for privacy information.
EXFILES (4) H2020 Project: An Inside View from an LEA Partner
December 16, 2021
EXFILES (4) H2020 Project: An Inside View from an LEA Partner
EXFILES (3) H2020 Project: A Look from the Inside
In this episode, we look at the EXFILES project once again. We speak with project partner Renaud Feil from Synacktiv in Paris about developing methods to access locked phones. There is no easy solution but in EXFILES, partners across Europe have resolved to make inroads to this challenging aspect of cybersecurity.
The EXFILES project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 883156
See omnystudio.com/listener for privacy information.
EXFILES (3) H2020 Project: A Look from the Inside
December 07, 2021
EXFILES (3) H2020 Project: A Look from the Inside
REALHOLO (1) H2020 Project: An Introduction
In this episode, we introduce the REALHOLO project. Partners Hagen Stolle and Johannes Pleikies from SeeReal Technologies speak about the goals and challenges in this H2020 project which aims to bring holography to the forefront by prototyping practical applications.
This project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 101014977.
This project is an initiative of the Photonics Public Private Partnership.
See omnystudio.com/listener for privacy information.
REALHOLO (1) H2020 Project: An Introduction
December 03, 2021
REALHOLO (1) H2020 Project: An Introduction
DECODER (4) H2020 Project: Weighing in with The UPV
Three partners from the Universitat Politècnica de València discuss their particular roles in the DECODER H2020 project. We speak with Tanja Ernestina Vos, Borja Davó Gelardo and Nacho Mansanet Benavent about the project goals and progress as the consortium reaches completion of their efforts.
The DECODER project has received funding from the European Union's Horizon 2020 research and innovation programme under grant agreement number 824231.
See omnystudio.com/listener for privacy information.
DECODER (4) H2020 Project: Weighing in with The UPV
December 02, 2021
DECODER (4) H2020 Project: Weighing in with The UPV
DECODER (3) H2020 Project: Open source software development solutions
In this episode we speak with Olivier Bouzereau from OW2 about the DECODER project and how their commitment to open source technologies will make their work available to developers around the world.
The DECODER project has received funding from the European Union's Horizon 2020 research and innovation programme under grant agreement number 824231.
See omnystudio.com/listener for privacy information.
DECODER (3) H2020 Project: Open source software development solutions
November 22, 2021
DECODER (3) H2020 Project: Open source software development solutions
SERENA (5) H2020 Project: Signal Processing
SERENA partners are exploring the use of high frequencies for data delivery. Using gallium nitride on silicon as a means to develop high performance millimeter-wave active antenna systems, at a commercially viable price-point while remaining energy efficient is at the heart of SERENA. In this episode we speak with SERENA partners Giuseppe Caire and Thomas Kuehne from the Technische Universität Berlin.
The SERENA project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No 779305.
See omnystudio.com/listener for privacy information.
SERENA (5) H2020 Project: Signal Processing
November 16, 2021
SERENA (5) H2020 Project: Signal Processing
Car2TERA (5) H2020 Project: Focus on the Demonstrators
Today we zero in on the circuits used in the demonstrators for the Car2TERA project. Herbert Zirath from Chalmers University of Technology talks about some of the challenges involved and how his team has dealt with them.
See omnystudio.com/listener for privacy information.
Car2TERA (5) H2020 Project: Focus on the Demonstrators
October 29, 2021
Car2TERA (5) H2020 Project: Focus on the Demonstrators
Car2TERA (4) H2020 Project: Checking in with Jonas Hansryd & Yinggang Li from Ericsson
In this episode we speak with with Jonas Hansryd & Yinggang Li from Ericsson about the progress of the Car2TERA project. They share some details about why this project is so important for the future of automobiles and what Ericsson is doing to push this effort forward.
The Car2TERA project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 824962.
See omnystudio.com/listener for privacy information.
Car2TERA (4) H2020 Project: Checking in with Jonas Hansryd & Yinggang Li from Ericsson
October 12, 2021
Car2TERA (4) H2020 Project: Checking in with Jonas Hansryd & Yinggang Li from Ericsson
Ethics and Technology (5) – a Prerequisite for European Research: Engineering and Technology
In this episode we speak with Elisabeth Oswald professor from the department of artificial intelligence and cybersecurity at The University of Klagenfurt about the ethics considerations in the world of education and research.
See omnystudio.com/listener for privacy information.
Ethics and Technology (5) – a Prerequisite for European Research: Engineering and Technology
October 07, 2021
Ethics and Technology (5) – a Prerequisite for European Research: Engineering and Technology
REINDEER (1) H2020 Project: Using RadioWeaves for smart connect-compute platform
In this episode we speak with Liesbet Van der Perre, Technology Lead in the REINDEER project. She informs us about the overarching goals in REINDEER and explains how the project will benefits residents of the EU and the EU itself.
The REINDEER project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No.
101013425.
See omnystudio.com/listener for privacy information.